MeKO Analysis Results

Information:
Allele Symbol cla-1S
AGI Code AT4G15560
Gene Name 1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE / 1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 2 / CLA / CLOROPLASTOS ALTERADOS 1 / DEF
Description Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis
Size/Weight nomal
Color nomal
Shape nomal

 

Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
lactic acid -0.7541655922312 -3.47919682031345 0.000539417025172163 0.078936923058104 -0.394148404533653
U 1.61105750839375 3.42652233708755 0.000655078199652316 0.078936923058104 -0.565610598849497
U 1.09390241320999 3.17772220079567 0.00156129028375384 0.125423652794892 -1.33105312345445
U -0.66061841671943 -3.02078596396341 0.00262880082634993 0.158385249787583 -1.7861008373979
U 0.507856075975063 2.56133083307802 0.0106679648663075 0.320685848207529 -2.98991447960115
l-threonic acid 0.766678952142708 2.5551056768873 0.0108618107941934 0.320685848207529 -3.00484957343581
1096:phosphoric acid -0.484490464146699 -2.53806115835864 0.0113955659983873 0.320685848207529 -3.0457290435815
1104:threonic acid-1,4-lactone 0.615280874084561 2.52704645142913 0.0117587211812073 0.320685848207529 -3.07195966621122
U -0.900792144407214 -2.52060970623671 0.0119758200575426 0.320685848207529 -3.0873094934591
U 0.733529041976702 2.43486882548785 0.0151883750510356 0.366039838729958 -3.28724794946747
U -0.356683481353784 -2.38480507740532 0.0173934877342236 0.381075503995262 -3.40098393535376
U 0.727873060122342 2.33993953609578 0.0196124799630523 0.3938839725913 -3.50096560787203
U -0.595352550784522 -2.25707022867992 0.0243721491267406 0.45182214919573 -3.6803435985369
U -1.39498896457498 -2.14231348842976 0.0327785023906536 0.564258505439109 -3.87074723144588
U 0.347763967257521 2.07178561465923 0.0387062830914874 0.621880948336564 -4.05909756621361
U 0.892037412658759 1.8957883309074 0.058507846325636 0.881274435279892 -4.38843809814745
U 1.00022490503937 1.78029496428179 0.0756144850470265 0.976600494992773 -4.58844091970144
U -0.671051064539533 -1.76736122669761 0.0776932191247642 0.976600494992773 -4.61129866864168
U 0.821163124477703 1.62730182003556 0.104225290191167 0.976600494992773 -4.65692573495969
U 0.665304334871831 1.73696859666318 0.0829297652533815 0.976600494992773 -4.66147440244242
l-valine -0.314903407852661 -1.69743857986678 0.0901252202400891 0.976600494992773 -4.72636157684529
U 0.415870085310466 1.69691890806081 0.0902268858652254 0.976600494992773 -4.72720431147441
succinic acid 0.426399589090945 1.64159326943382 0.101199780138165 0.976600494992773 -4.81445060884329
U 0.480448390257955 1.62403916993876 0.104894970211468 0.976600494992773 -4.84150798914708
U 0.398604880119716 1.60942894898374 0.108042190927778 0.976600494992773 -4.86419564519034
U -0.96020399015079 -1.53013320246822 0.126622087407544 0.976600494992773 -4.92570775758896
U 0.565614032141729 1.56094932058428 0.119070684867565 0.976600494992773 -4.93679660939137
U -0.419652937696927 -1.48014237363538 0.139366899556481 0.976600494992773 -5.05310596117211
U 0.93400028886065 1.41879178745739 0.156510766940071 0.976600494992773 -5.08243620301186
U 0.339847715524133 1.42944779025592 0.153397449451953 0.976600494992773 -5.12312541711919

U: unknown peaks
Limma result myTopTable_ALL_cla1S.tbl.gz