MeKO Analysis Results

Information:
Allele Symbol cob-2
AGI Code AT5G60920
Gene Name COBRA
Description Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.
Size/Weight slightly small
Color yellow green
Shape nomal

 

Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
1104:threonic acid-1,4-lactone 1.44602363275655 5.93902564463251 4.85996481020508e-09 1.17125151925942e-06 10.2078009229139
d-glucose 1.01988373564484 5.16280029314548 3.31458420969084e-07 3.29667355669575e-05 6.16917883000077
l-threonic acid 1.53659726316788 5.12100714286848 4.10374301663372e-07 3.29667355669575e-05 5.96589485016578
U 2.61067559064933 4.70769371193354 3.21390573581976e-06 0.000193637820583141 4.18913470317996
U 1.36169006251796 4.51998011457996 7.45633449931624e-06 0.000359395322867043 3.21665445370269
U 2.73479600998124 4.43032060391013 1.1469528257922e-05 0.000377319444215588 3.00569508818198
U 1.51224970186606 4.39299648006528 1.32349749482753e-05 0.000377319444215588 2.67593706583873
U 1.29688540447073 4.38380633277076 1.37802076732417e-05 0.000377319444215588 2.63790321512286
U 2.0594796732429 4.38026145334836 1.40907676263083e-05 0.000377319444215588 2.61789010101738
U -1.84461636701254 -3.92024161089857 9.95358540574132e-05 0.00239881408278366 0.787555385559416
U 0.799798316115016 3.28939603036467 0.00106258502787351 0.0232802719743196 -1.40101322351929
U -0.812962120726594 -3.25333124817714 0.001204095129984 0.024182243860512 -1.5152444499941
1096:phosphoric acid -0.575607489962707 -3.01538858005738 0.00267368732441552 0.0495660496295493 -2.23892619341603
U 0.966889280439887 2.98471102190988 0.0029524116911222 0.0508236583971749 -2.32832838943458
U 1.24006107889487 2.92976548459322 0.0035264582542905 0.0566584292856007 -2.4869418561008
U 0.571050492857974 2.89523305221153 0.00392472410922394 0.0577471489906823 -2.58414003125744
U 0.502878000776168 2.88354038662718 0.00407345034374107 0.0577471489906823 -2.61708980877436
U -0.889351810669186 -2.8590554827423 0.00439610084494678 0.058858905757343 -2.68562379363399
U 1.28698909888188 2.76419700229648 0.00589143124362686 0.0747281541954775 -2.9452407292873
dehydro-l-ascorbic acid dimer -0.633112945158327 -2.67384951186801 0.00770134211881516 0.0923349147304308 -3.18447136821152
d-fructose-6-phosphate -0.723830310502198 -2.65898034399168 0.0080457809516143 0.0923349147304308 -3.22319358630056
U 0.46394115701176 2.59129599874504 0.00979092225778532 0.10725510291483 -3.39640394571734
lactic acid 0.548992554569036 2.53267076873854 0.011573747127891 0.121272741644423 -3.54288905724761
nicotianamine 0.489548339336512 2.47013507849696 0.0137798516336294 0.135431174483344 -3.69564568557799
sucrose 0.472530501588235 2.46323517912364 0.0140488770210938 0.135431174483344 -3.71220151095943
U -0.615091543353234 -2.38238451770998 0.0175128169307815 0.162330341550705 -3.90351438507204
U 0.460294451365463 2.36182742839451 0.0184991617285391 0.165122147280664 -3.95131450104029
l-phenylalanine -0.57034501495297 -2.31909434792184 0.0207208106463316 0.178346977348782 -4.0490945472523
U 0.874554081197676 2.28327533055474 0.0227791756315837 0.188470409662751 -4.12931465424237
U 0.592484811226754 2.27157714322179 0.0234610468459856 0.188470409662751 -4.15569778850328

U: unknown peaks
Limma result myTopTable_ALL_cob2.tbl.gz