MeKO Analysis Results

Information:
Allele Symbol fad6-1
AGI Code AT4G30950
Gene Name FATTY ACID DESATURASE 6 / FATTY ACID DESATURASE C / STEAROYL DESATURASE DEFICIENCY 4
Description "Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition."
Size/Weight slightly small
Color nomal
Shape nomal

 

Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
succinic acid -1.41144702662867 -5.43392160394838 8.03306904229093e-08 1.93596963919211e-05 7.5185308470489
l-tyrosine 1.37651271374179 5.27905692046064 1.81823016878121e-07 2.19096735338136e-05 6.73841592013265
l-tryptophane 1.15513872251202 5.12944435945361 3.91434807071822e-07 3.14452628347697e-05 6.00723124409813
l-isoleucine 1.1447191902504 5.06312389943468 5.47617876840914e-07 3.29939770796651e-05 5.68764536491578
1109:34294-79-6 1.37152692334024 4.58028937280278 5.63620814630315e-06 0.000232002376434709 3.47685205970369
l-lysine 1.32616620573972 4.57532488473172 5.77599277430812e-06 0.000232002376434709 3.45396848585374
U 1.72454467059705 4.47920219417021 9.025571552679e-06 0.000310737534885091 3.03389535760578
1154:arginine, dl-, -nh3 (3tms) 1.08729285946042 4.27673605748806 2.20247179542926e-05 0.000663494628373064 2.19270053725279
succinate-d4 -0.585217812471804 -3.94913839983261 8.77707188926418e-05 0.00235030480590296 0.898892987024021
sucrose -0.749972398271819 -3.90950084404215 0.000103048972335346 0.00248348023328184 0.749285782706832
U 1.24633908270625 3.65798885538831 0.000276580937793993 0.00605963690985021 -0.167571995512872
U 0.649355436330829 3.47398776213719 0.000549287407703616 0.0110315221047143 -0.800686152927212
l-valine 0.636187698050716 3.42927232852681 0.000646133571326951 0.0112201420911668 -0.949913199723386
l-threonine 0.636792092024638 3.42685894752041 0.000651792486623797 0.0112201420911668 -0.957918725214907
l-phenylalanine 0.831107626222462 3.37938782308141 0.000773018235799649 0.0124198263218477 -1.11435602693111
alpha-tocopherol 0.905617717544889 3.25159748648793 0.00121220254730673 0.0182588008688076 -1.5252123102115
l-ornithine 0.873293494334682 2.99703603696835 0.00283861497470645 0.0402415417002502 -2.29711041708554
U -0.504725645548607 -2.89413492111317 0.00394035089743275 0.0527569203489607 -2.59172674391459
spermidine 0.581711658880163 2.83950282887054 0.00466937067081427 0.0592272806140125 -2.74407507368454
U 0.699016927281916 2.79734264924729 0.00531631400463207 0.0640615837558165 -2.85986818639561
U -1.41904278161524 -2.64994482676601 0.0082746348578935 0.0949612857501112 -3.13019744042985
U 0.883526704087842 2.58612306063759 0.00994371443185455 0.107056522489896 -3.41400274196381
U 0.434128000085792 2.57645178006673 0.0102170125197826 0.107056522489896 -3.4383851938729
shikimic acid -0.489130407178727 -2.55696361808209 0.0108005511042116 0.108455534004792 -3.48717906815362
l-alanine 0.417397965348592 2.45803047238292 0.0142482960958885 0.137353574364365 -3.72940855604884
proline-13c5 0.779654098476428 2.40138623960747 0.0166350980993572 0.154194563151734 -3.86379453840756
putrescine -0.476100887769507 -2.38613781019185 0.0173316813893105 0.154701304252734 -3.89954068073719
U 0.683814959338392 2.33203774376125 0.0200246533021589 0.172355051636439 -4.02429954871764
sinapic acid 0.344836001114768 2.26222693227765 0.0240353339123145 0.19974191285751 -4.18112467428355
U 0.436872167785125 2.15092321681149 0.0318754454700263 0.249431465453864 -4.42148453434331

U: unknown peaks
Limma result myTopTable_ALL_fad61.tbl.gz