MeKO Analysis Results

Information:
Allele Symbol fah1-2
AGI Code AT4G36220
Gene Name CYP84A1 / FERULIC ACID 5-HYDROXYLASE 1
Description encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.
Size/Weight nomal
Color nomal
Shape big leaf

 

Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
U -5.30970269936516 -19.6983363842866 4.48970817357836e-67 1.08201966983238e-64 141.950632854083
sinapic acid -1.71541035401813 -11.2536031337291 8.05872851610611e-27 9.71076786190786e-25 49.9817340841762
U -2.62897517352086 -7.11165249908868 3.31183589905839e-12 2.66050817224357e-10 16.8105320860161
U -3.5515309250509 -6.92703693784816 1.20189524020357e-11 7.2414188222265e-10 15.5539252936171
U 1.62715788715211 6.56623414063716 1.12230698022932e-10 5.40951964470532e-09 13.3656734287032
succinic acid 1.68596910426103 6.49080253554832 1.79347583614671e-10 7.20379460852261e-09 12.9080107598786
lactic acid -1.37827786352751 -6.35841784574981 4.04334992149776e-10 1.39206761582994e-08 12.1151210363828
succinate-d4 0.884196507587884 5.96669189949073 4.14639263209808e-09 1.24910078041955e-07 9.8492413261224
U 1.26609042800084 5.94144963313951 4.8007474489818e-09 1.28553348356068e-07 9.70689976917582
U 1.35495320480012 5.2188326048927 2.4877814416466e-07 5.9955532743683e-06 5.88334917763689
l-threonic acid 1.50926265037951 5.02990926661156 6.49613865143406e-07 1.42324492272328e-05 4.95835662746579
1104:threonic acid-1,4-lactone 1.21539254420198 4.99179081503017 7.85279260050406e-07 1.57710251393456e-05 4.77575369594012
l-glutamic acid 0.793164789050216 4.66572358534679 3.78448449077073e-06 7.01585201750574e-05 3.26572334562922
U 1.57310632381763 4.56978138912629 5.93882234125886e-06 0.000102232584588813 2.83552002894764
U 1.37057101178318 4.54945944705239 6.51466729306875e-06 0.000104668987841971 2.74694927068396
U 2.11525330926499 4.49888515775033 8.27069820657752e-06 0.000124577391736574 2.52022863465575
U 1.16716678354905 4.35991961203158 1.52931226959561e-05 0.000216802504101495 1.93238993472058
shikimic acid 0.815777115510766 4.26453226830935 2.32208183644048e-05 0.000310900956990087 1.53493517957724
U 1.1597456236902 3.92023859009434 9.87091207266914e-05 0.00125204726816488 0.165475303958622
U 1.1220800020196 3.60722151050184 0.000335172797901668 0.0040388322147151 -0.982849377962165
U -1.73410722686556 -3.51403553519818 0.000480911734547061 0.00551903466789722 -1.31364544719395
U -0.847856100147592 -3.48704721421906 0.00052395373921942 0.0057396750523582 -1.39944549554322
U -1.79159579076562 -3.35283533113512 0.000861114481228625 0.00902298217287385 -1.72245362978324
U 0.469956072706275 3.30728965132052 0.000997553933614202 0.0100171040833759 -1.99712338470914
sucrose 0.623854162477645 3.2520641831429 0.00121002995426324 0.0116646887590977 -2.17501589857589
citric acid 0.860942955737034 3.07695161948027 0.00218687648377959 0.020270662791957 -2.71899887305652
d-glucose 0.590549556420811 2.98944802868003 0.0029093889977161 0.0259689906833178 -2.97982819553125
U 0.691655461194976 2.97331375777599 0.00306322036760732 0.0263655753069058 -3.02715510284188
d-glucose-6-phosphate 0.61810203983535 2.8238201115209 0.00490140887245423 0.0407323978710852 -3.45364302183117
4-aminobutyric acid 0.537912512878698 2.67317515922936 0.00771531446882505 0.0617652329388873 -3.86171872871667

U: unknown peaks
Limma result myTopTable_ALL_fah12.tbl.gz