MeKO Analysis Results

Information:
Allele Symbol fus6-1S
AGI Code AT3G61140
Gene Name ARABIDOPSIS THALIANA FUSCA 6 / CONSTITUTIVE PHOTOMORPHOGENIC 11 / COP9 SIGNALOSOME SUBUNIT 1 / EMBRYO DEFECTIVE 78 / FUSCA 6 / SHAGGY-LIKE KINASE 31
Description "Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons, first become defective during embryogenesis and exhibit limited seedling development."
Size/Weight slightly small
Color nomal
Shape nomal

 

Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
putrescine-d4 -1.19905798923246 -6.17843702265792 1.18552290367395e-09 2.85711019785422e-07 11.5822647985384
l-serine -0.882978747268847 -4.81485832513726 1.86103257482205e-06 0.000224254425266057 4.56058911029618
glucose-13c6 -0.757909424049089 -4.60849542106281 4.94412208709612e-06 0.000397177807663389 3.6372863891265
U -0.717372849764608 -4.11347002925827 4.44247687215114e-05 0.00267659231547106 1.57558861703058
U -0.679363493351506 -3.9047218500858 0.000104890261937692 0.00505571062539674 0.774257899867203
U -0.703048937566688 -3.81321166479591 0.000151156206839942 0.00607144097473767 0.434919129380607
l-5-oxoproline -0.507151359176202 -3.66956188798707 0.000264290702869431 0.00909915134164756 -0.0822853867028988
U -0.425856771016061 -3.49516324827928 0.000508234098001329 0.01531055220229 -0.684655042207511
spermidine -0.701297923103418 -3.42323796701386 0.000660369716569537 0.0176832335214731 -0.924886155671048
U -0.715898509470275 -3.01117087349414 0.00271219070301931 0.0653637959427654 -2.20838027439927
U -0.676778849829955 -2.91254274154236 0.00371714013974232 0.0814391612434455 -2.49178487028892
glutamate-13c5 -0.365688080051395 -2.73738726816551 0.00637401609217084 0.115785892193542 -2.97266324289615
U -0.363863857067006 -2.7235557288056 0.00664373609323725 0.115785892193542 -3.00940030053204
U -0.496512027252667 -2.70039755477671 0.00711843217257079 0.115785892193542 -3.07050274702159
beta-alanine -0.637176669399139 -2.69628065758366 0.00720659080042791 0.115785892193542 -3.08136315226305
U -0.430078822918254 -2.64597823024347 0.00835616060252616 0.125538533186366 -3.21208225742452
U -0.520873181954986 -2.62605774282122 0.0088554152040175 0.125538533186366 -3.26320429831556
l-valine -0.475624069894636 -2.56377868774971 0.0105930524388803 0.141829202098342 -3.4205950716753
lactic acid -0.544775239822354 -2.51321500437052 0.0122248400186954 0.155062444447663 -3.54558341750004
sucrose -0.472588191516696 -2.46353590862319 0.0140372179020341 0.169148475719511 -3.66606821832794
U -0.356878268660399 -2.33428631086284 0.0199052882748991 0.228436879726223 -3.96861506406721
nicotianamine -0.449281598277324 -2.26695945395729 0.0237434381545089 0.260098572510757 -4.11978766010085
fumaric acid 0.71328920580709 2.23032798723428 0.0261046096593419 0.273530909908756 -4.14188090135786
U -0.647904610525025 -2.20741777072788 0.0276642589273561 0.277795266728867 -4.19155008407171
sinapic acid -0.330754830576794 -2.16985025720306 0.0304045181506007 0.29309955497179 -4.33026038767528
U 0.481532719443248 2.11769428791542 0.0346134516070525 0.308957105085172 -4.38074032610031
U -0.381350069057255 -2.13586902895956 0.033093316999595 0.306749592188554 -4.40181177840429
U 1.03061880959532 2.05287307761043 0.0405537056588725 0.349051537992439 -4.51217266857475
U -0.40331909000793 -1.98572593644377 0.047512221592777 0.388221303765988 -4.70433568494038
l-threonine -0.367646974117623 -1.97847042788815 0.0483263033733595 0.388221303765988 -4.71840671201885

U: unknown peaks
Limma result myTopTable_ALL_fus61S.tbl.gz