MeKO Analysis Results

Information:
Allele Symbol pad2-1
AGI Code AT4G23100
Gene Name ATECS1 / CADMIUM SENSITIVE 2 / GLUTAMATE-CYSTEINE LIGASE / GSHA / PHYTOALEXIN DEFICIENT 2 / ROOT MERISTEMLESS 1
Description "Encodes the enzyme glutamate-cysteine ligase catalyzing the first, and rate-limiting, step of glutathione biosynthesis. Required for cell proliferation at the root tip. Involved in susceptibility to the bacterial pathogen Pseudomonas syringae. Mutants are phytoalexin defective."
Size/Weight slightly small
Color nomal
Shape nomal

 

Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
l-isoleucine -2.48574345163165 -10.9945104310398 9.07936584406385e-26 2.18812716841939e-23 47.6901300122633
U -3.04915151796218 -8.07439654357872 3.80248900124163e-15 4.58199924649616e-13 23.6188381611334
U -1.44871991610746 -7.5447679148128 1.69398213721408e-13 1.36083231689531e-11 19.8985357874712
l-tyrosine -5.2712917775016 -7.24014276916488 1.38057935530243e-12 8.31799061569712e-11 17.8654292068782
U -1.40442390404598 -6.31356563958198 5.26077741673469e-10 2.2161719836369e-08 12.0509142482255
U 1.01485343697556 6.30588031485644 5.5174406231624e-10 2.2161719836369e-08 12.0046747740498
U -2.34777822497586 -6.06354307190204 2.41678167957519e-09 8.32063406825172e-08 10.6226261465794
U -1.36125388212413 -5.61651332332217 2.98655363364142e-08 8.99699282134477e-07 8.13536617963971
l-threonine -0.997449532348057 -5.36771561304931 1.13560311516547e-07 2.79996155887818e-06 6.84507004151039
l-tryptophane -1.20784956688047 -5.36350918479321 1.16180977546813e-07 2.79996155887818e-06 6.82312612982802
U 1.05662418027972 5.18049188747883 3.02124738133266e-07 6.61927835364701e-06 5.90286556543713
U -3.4859963660454 -5.08230478084126 4.99702885755688e-07 1.00356996222601e-05 5.7763999754354
U 1.38224847738196 5.02512436928878 6.65650237309854e-07 1.23401313224365e-05 5.14418147624517
U 0.87712934693236 4.91263423954718 1.15986805924088e-06 1.99663001626465e-05 4.61089575075296
U -0.769628381460123 -4.70897542680722 3.0864677606393e-06 4.95892486876048e-05 3.67362129935307
l-phenylalanine -1.14737752841054 -4.66538090332714 3.79184376747143e-06 5.71146467475384e-05 3.47699396507834
glycine -2.05925159863076 -4.60054779251678 5.24494326915199e-06 7.27678825932702e-05 3.1719171779338
l-glutamic acid 0.779966215226263 4.58808411113728 5.4349455878791e-06 7.27678825932702e-05 3.13330783553535
U -3.48355402795317 -4.43929531964165 1.13264230105591e-05 0.000134818055018928 2.63807594941408
U -1.17831259621841 -4.43885095717372 1.07697393961269e-05 0.000134818055018928 2.48237230322612
U -1.49929435396099 -4.41930072376691 1.17476313501971e-05 0.000134818055018928 2.39943045406124
l-lysine -1.26450631797902 -4.3625958786386 1.51208038215696e-05 0.000165641532772649 2.15943844140483
U -2.2448106229669 -4.35078191528783 1.63961525616473e-05 0.00017180316379813 2.14578506903027
U -0.900201790530982 -4.13023446383079 4.13095198781502e-05 0.000414816428776425 1.20649482408565
U -1.02209831061968 -4.06433291329705 5.45440129706741e-05 0.000525804285037299 0.944177519791573
U -0.840830983420954 -3.90696298312041 0.000103946213269082 0.000960567796397619 0.336253132120582
U -0.965510982775985 -3.89840015449562 0.000107615479264464 0.000960567796397619 0.303660747836521
U -0.914492417613566 -3.86078014939203 0.000125142917985118 0.00107712297265763 0.161853831826886
U -0.953718470918126 -3.85038235026178 0.000130508045341949 0.00108456685956585 0.12251459390371
l-threonic acid 1.15254115793093 3.84106599932774 0.000135573201042263 0.00108910471503951 0.0872411121345058

U: unknown peaks
Limma result myTopTable_ALL_pad21.tbl.gz