MeKO Analysis Results

Information:
Allele Symbol phyB-9
AGI Code AT2G18790
Gene Name HY3 / OUT OF PHASE 1 / PHYTOCHROME B
Description Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response.
Size/Weight nomal
Color yellow green
Shape long leaf

 

Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
U 2.55192980688294 8.7867049605048 1.67830498422901e-17 4.04471501199191e-15 29.0229479971014
U -2.31240340812359 -7.12629138355303 2.94342781787021e-12 3.5468305205336e-10 17.2169437706056
palmitic acid -3.28154954728283 -6.59081357565017 9.94105708534439e-11 6.66661876451014e-09 13.8607889373132
U -3.18228221238823 -6.57197827539805 1.10649274099753e-10 6.66661876451014e-09 13.690541592691
l-proline -3.4678229462492 -6.33833838286267 4.86457541566073e-10 2.34472535034847e-08 12.2563736698828
succinate-d4 0.944301701804914 5.06596109377542 5.42098304823037e-07 2.1774281910392e-05 5.48202590541599
U -1.46382084052881 -4.74802762271791 2.5676549594922e-06 8.52437491487066e-05 3.9942927825068
succinic acid 1.54478153111068 4.72805057991948 2.82966802153383e-06 8.52437491487066e-05 3.90199983728969
U -1.4141375522211 -4.60581614228798 5.02221923161309e-06 0.000134483870535417 3.35533018022223
U 3.07624524101957 4.56717375476815 6.12604361783032e-06 0.000147637651189711 3.16964369761293
U -2.08781726101079 -4.4899632488838 8.56142251435261e-06 0.000187572984178089 2.84828204773245
U -0.996239231679514 -4.42323147113566 1.1520171747141e-05 0.000215533537682971 2.56574205550621
U -0.724656592548342 -4.421804985793 1.16262904144341e-05 0.000215533537682971 2.55755959074241
U 2.25313258326329 4.38564600314939 1.38335094485766e-05 0.000238133984079069 2.39484195891705
U -2.88962621196765 -4.22115371611581 2.82351896150565e-05 0.000425292543576789 1.92011870311113
U -1.14264515815358 -4.26290189666154 2.34483536634104e-05 0.000376736882192127 1.89296825822739
U 2.60862091104381 3.9201985797716 9.93891202992138e-05 0.00138793560228153 0.533594047068364
U -1.26917068533423 -3.90811616972846 0.00010366324000443 0.00138793560228153 0.49249950701878
U -1.97022640563733 -3.87356483139643 0.000119230899738503 0.00151234983352522 0.455211874091551
U 2.27223029567911 3.84033358945561 0.000137047750869626 0.00165142539797899 0.232617820838205
U -2.36417970724477 -3.7420957939607 0.000205662348711019 0.00236022028758837 -0.141729912060687
proline-13c5 -1.51589798480386 -3.71174684282201 0.000224913154363877 0.00246382137280429 -0.232536579318261
l-glutamic acid -0.734559272505869 -3.43482273290921 0.000633292301434155 0.0064411037509902 -1.19463384418313
U -1.60320845924414 -3.43221949275259 0.000641437717940933 0.0064411037509902 -1.20538260312353
U 1.60605713840686 3.41217774671166 0.000690630385566216 0.00665767691685833 -1.27309308937962
sinapic acid -0.6511208990194 -3.3955263651529 0.000729580302053385 0.00676264818441791 -1.32543088084093
U -1.13863862388721 -3.38106388985316 0.000768640113313309 0.0068608247151299 -1.3734903900581
citric acid -1.16857267378932 -3.32023082466779 0.000954143947752555 0.00821245326458449 -1.57250987107829
U -1.06053522780232 -3.26282184666913 0.00116527352112218 0.00968382477898084 -1.75666034492828
myo-inositol -0.986621688992674 -3.24191104400271 0.00125275060157398 0.0100637631659776 -1.82311379283786

U: unknown peaks
Limma result myTopTable_ALL_phyB9.tbl.gz