MeKO Analysis Results

Information:
Allele Symbol prc1-1
AGI Code AT5G64740
Gene Name CELLULOSE SYNTHASE 6/ISOXABEN RESISTANT 2/PROCUSTE 1
Description " Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening."
Size/Weight -
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Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
l-tyrosine -3.34410544842487 -12.8249618285538 1.91944977532936e-33 4.62587395854375e-31 65.1332365545729
l-isoleucine -2.15525077119943 -9.53273237827683 3.62329112226431e-20 4.36606580232849e-18 34.9314595575149
l-lysine -2.27292910809665 -7.8416936463141 2.02908845447885e-14 1.63003439176468e-12 21.9151394567843
succinic acid 1.60013924860163 6.1603666792021 1.33285656556302e-09 8.03046080751722e-08 11.0761528703254
succinate-d4 0.860477510809041 5.80663251819952 1.03521197199076e-08 4.98972170499544e-07 9.08609880930637
U -1.36753856275018 -5.15168884531761 3.51003301203049e-07 1.40986325983225e-05 5.6812460358791
U -2.07222675617498 -5.04422849260135 6.09841056890963e-07 2.0995956387246e-05 5.20707617427141
U -1.70513758371639 -4.9910156720859 7.9078053842285e-07 2.38222637199883e-05 4.90046523796912
l-valine -0.809945623783282 -4.3658878091509 1.48782791368193e-05 0.000398407252441494 2.09301476412502
U -1.53519966156293 -4.29581806632354 2.03301186490471e-05 0.000474597181615791 1.79709895489365
U -0.699597017552097 -4.28048814685135 2.16621120239573e-05 0.000474597181615791 1.73602268343652
1201:galactonic acid -0.71763258394877 -4.18128273819421 3.32476900491196e-05 0.000619280182895373 1.32965943374381
U -0.899630408109026 -4.18017743431775 3.34051550939413e-05 0.000619280182895373 1.32518253360399
U -1.06747413126547 -4.13456154756838 4.06563507593656e-05 0.000699870038071936 1.13982103300358
U -0.781942938105352 -4.07226954295154 5.28202802499276e-05 0.000848645836015504 0.892153992658885
1109:34294-79-6 -1.17099399063039 -3.91059864711802 0.000102449518517051 0.00154314587266309 0.266638481588685
U -0.702710952838803 -3.77052446723601 0.000178795981419867 0.00253469597189341 -0.256708591662646
U 1.74005084539675 3.70087539293651 0.000235536170768751 0.00315356761973716 -0.51347035931232
l-threonic acid 1.09498036448662 3.64923353844611 0.000286004623636968 0.00362774285771101 -0.695961168209132
l-threonine -0.66238686216975 -3.56459568794166 0.000393006614444643 0.00473572970405794 -0.993167413102724
U -0.862956475758878 -3.48432044630812 0.00052891238949015 0.00606989932700601 -1.26959711036801
U 1.01751095468579 3.43944881439666 0.000623521474090854 0.00653555749598652 -1.42184237503835
hydroxylamine 0.69958895391289 3.43902649514603 0.000623725404181286 0.00653555749598652 -1.42277248678047
U 0.825494016324949 3.38531125464811 0.000757297544743745 0.00760452951180177 -1.60226761948928
U 1.13733553630561 3.3038928699926 0.0010107449032417 0.00974358086724999 -1.86907388409878
U -0.821010987015466 -3.28554139369608 0.00107667127304839 0.00997991449248702 -1.92793279971712
U -1.52687531533164 -3.21440727719851 0.00137822713712044 0.0106933986788513 -1.94138020989853
U 0.983772985747379 3.26552602184423 0.00115502667910236 0.00998627037190171 -1.99226106467728
U -0.7174864203105 -3.26225802140266 0.00116713723354564 0.00998627037190171 -2.00240516226336
U 0.895103351718049 3.25412235162657 0.00120166738915 0.00998627037190171 -2.02872915777268

U: unknown peaks
Limma result myTopTable_ALL_prc11.tbl.gz