MeKO Analysis Results

Information:
Allele Symbol rsw2-1
AGI Code AT5G49720
Gene Name ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1 / DEFECTIVE CYTOKINESIS / IRREGULAR XYLEM 2 / KORRIGAN / KORRIGAN 1 / RADIALLY SWOLLEN 2 / TUMOROUS SHOOT DEVELOPMENT 1
Description "Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1."
Size/Weight small
Color nomal
Shape altered root

 

Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
palmitic acid 4.07053914727323 11.4722130444331 1.44643453820375e-27 3.48590723707103e-25 51.7638038668355
U 4.64982021031963 11.380809607204 4.00745863692907e-27 4.82898765749953e-25 50.7603453479661
d-glucose 1.78953420672799 9.05888328658126 1.84710144118174e-18 1.48383815774933e-16 31.0753752191734
U 2.04237946969676 7.83044971489238 2.17523638342449e-14 1.31057992101326e-12 21.8640331824218
U 1.34123963975503 7.49135716745077 2.41169059831943e-13 1.14482694597666e-11 19.5064080524556
U 2.96363749518702 7.49533732694872 2.85019156674688e-13 1.14482694597666e-11 19.3539060597158
U 2.9733348496263 6.75442660621124 3.83299645206819e-11 1.31964592135491e-09 14.5616976174868
U 2.24910808388136 6.62944201495043 7.5053222904144e-11 2.26097833998734e-09 13.897109588021
U 1.58354182841701 6.51276215435575 1.55739601530701e-10 4.17036044098876e-09 13.1855636035552
U 1.31478199907544 6.16994714856185 1.26033985229055e-09 3.03741904402023e-08 11.1512367000362
U 1.98797417870979 6.13671964567431 1.51899932278939e-09 3.32798942538403e-08 10.9688260524769
d-fructose 1.0036354841863 5.70016412522318 1.86718043279911e-08 3.74992070253821e-07 8.5350958348344
U 1.24586441865679 5.67587952582053 2.13999686498808e-08 3.96722495740098e-07 8.4031983310895
U 1.35328798280378 5.41562019925748 8.8202081413491e-08 1.45045148361911e-06 7.0341586107786
U 1.40514366407311 5.4121496909592 9.02770632957952e-08 1.45045148361911e-06 7.01244070687575
U 1.22734352557307 5.35620430716738 1.2102686011267e-07 1.82296708044709e-06 6.72892705325487
U 2.00799065961421 5.28848700628809 1.74965405516975e-07 2.48039192527006e-06 6.37522219533194
U 0.88565278224722 5.26229380952865 1.9756393442968e-07 2.64516156653072e-06 6.25616985285072
stearic acid 2.04215922363289 5.16002252036533 3.39335846612417e-07 4.3042073175575e-06 5.73717291136874
U 1.35538403366895 5.06300000438574 5.48710394965994e-07 6.61196025934023e-06 5.27300922790067
U 1.72140315862541 5.0522956852233 5.80387145173814e-07 6.66063342794711e-06 5.21934753611347
alpha-tocopherol 1.39469099284394 5.00760269913108 7.26489716633685e-07 7.95836462312354e-06 5.00386538973756
U 0.870406113931541 4.99097430870904 7.88473072642595e-07 8.26182654377675e-06 4.92511858655947
succinate-d4 0.731757007460242 4.93800707347245 1.02516955795565e-06 1.02944109778046e-05 4.67310974825866
U 2.2910200271351 4.92065604651192 1.13138593856951e-06 1.090656044781e-05 4.58083177042451
U 1.03155523866933 4.87209720503955 1.410640403389e-06 1.30755514314134e-05 4.36623567809031
succinic acid 1.24425914623136 4.79026596681174 2.10271016241727e-06 1.87686351534283e-05 3.98433023432221
U 2.08197446627165 4.74273905703836 2.66524203202267e-06 2.29401189184808e-05 3.75913006418431
sucrose 0.905910280039166 4.72238313383361 2.90572729658764e-06 2.41475958095731e-05 3.67464888681085
1104:threonic acid-1,4-lactone 1.13315269638048 4.65402001090336 4.01010472832337e-06 3.22145079841978e-05 3.36660687699428

U: unknown peaks
Limma result myTopTable_ALL_rsw21.tbl.gz