MeKO Analysis Results

Information:
Allele Symbol tbr-1
AGI Code AT5G06700
Gene Name TRICHOME BIREFRINGENCE
Description "A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes."
Size/Weight nomal
Color nomal
Shape nomal

 

Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
U -1.64757979456536 -6.92995476806291 1.09202577427174e-11 2.63178211599488e-09 16.0792121666097
U -1.29756330747429 -5.03044757952975 6.45822954403216e-07 7.78216660055876e-05 5.52840925129146
sucrose -0.835652205876009 -4.35613765483389 1.55718919945091e-05 0.0012171806334017 2.51634126553496
lactic acid 0.931429844680384 4.29697109937042 2.02021681892398e-05 0.0012171806334017 2.27150945672597
U -1.06999927065129 -4.12128408649369 4.30031274958578e-05 0.00207275074530035 1.56278650500706
succinic acid -0.986209609990194 -3.79680257540199 0.000161519979964019 0.00648771919522142 0.328185954275519
U 1.85686340351951 3.75651059765854 0.000189972204374236 0.00654047160774157 0.22823636615156
1096:phosphoric acid 0.691350769115061 3.62172357093288 0.000317099528163143 0.00955262328591468 -0.297342725523923
U -1.31906599928869 -3.47405171646312 0.000550895641320285 0.014751761062021 -0.805472615862026
U -1.03405496315771 -3.32424185390527 0.000940406402086241 0.0226637942902784 -1.29694348518107
shikimic acid -0.579858217470953 -3.03124962987097 0.00253897608683364 0.0556266579024461 -2.19999404565919
U -0.4941696727033 -2.83360617662127 0.00475754201507039 0.0955473021359969 -2.7638373927956
U 0.769762858326789 2.7984506123514 0.00530055161424085 0.0982640722332343 -2.86024384294116
succinate-d4 -0.410236347080797 -2.76833697939071 0.00580882284363343 0.0999947360939755 -2.94189674170999
l-alanine -0.45724159701885 -2.69266712350819 0.00728388091500353 0.114237601464717 -3.14324089022228
l-tryptophane 0.603304801371749 2.67900153472294 0.00758423910139203 0.114237601464717 -3.17902624611478
U -0.757459569174641 -2.55750174269926 0.0107848357004784 0.151336617616611 -3.48938733238932
d-glucose -0.501969790849127 -2.54104432963379 0.0113031498634813 0.151336617616611 -3.53023022992919
U -0.409816295453041 -2.50746322677489 0.0124195461583722 0.15753213811409 -3.61306435369386
U 1.15618037615047 2.45715396509795 0.0143094875291309 0.172429324726027 -3.73495020539079
hydroxylamine 0.474887161889736 2.33444156430585 0.0198971065684391 0.228342984904468 -4.02237810710047
U -0.543894910184614 -2.17657165311297 0.0298983200427206 0.32752250592253 -4.37079759978085
1104:threonic acid-1,4-lactone 0.519005030580672 2.1316278077945 0.0334435620253201 0.350430367308789 -4.46538314768816
U -0.483138365121345 -2.07693284954738 0.0382289398895286 0.383882271390683 -4.57832106620454
d-glucose-6-phosphate -0.440094537264496 -2.01058680477581 0.0448113681949532 0.431981589399349 -4.71118267005157
l-glutamic acid -0.335155996403525 -1.97152629412969 0.0491164171553887 0.455271405171103 -4.78740733448959
U -0.79399858852689 -1.94337551898423 0.0524747474046284 0.468385708315387 -4.84060038867139
l-phenylalanine 0.468371218035522 1.90445610288189 0.0573229945590299 0.470909341114781 -4.91486988670873
U -0.404496960554422 -1.89820431838106 0.0581509146910894 0.470909341114781 -4.92630995473384
U -0.88222813398075 -1.89485083083444 0.0586194200557819 0.470909341114781 -4.93177300013231

U: unknown peaks
Limma result myTopTable_ALL_tbr1.tbl.gz