MeKO Analysis Results

Information:
Allele Symbol vtc1-1
AGI Code AT2G39770
Gene Name CYTOKINESIS DEFECTIVE 1 / EMBRYO DEFECTIVE 101 / GDP-MANNOSE PYROPHOSPHORYLASE 1 / SENSITIVE TO OZONE 1 / VITAMIN C DEFECTIVE 1
Description "Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+."
Size/Weight small
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Analysis results:
Normalization CRMN
Differential Accumulation limma
MS Type GC-TOF-MS
Visual phenotype
Metabolite profile
Red: significantly increase, Blue: significantly decrease (log2FC >= |1| and FDR < 0.05)
Replicate quality check
Volcano plot

blue-colored name: top 30 metabolites to be highlited.
Top 30 metabolites
ID logFC t P.Value adj.P.Val B
U 5.56422545130635 14.0724858517498 2.29174234549155e-38 5.52309905263463e-36 76.3731668683834
U 5.76255748481134 13.0906115737766 4.5937097405343e-34 5.53542023734383e-32 66.5629832412644
1096:phosphoric acid -2.19787547596846 -11.5138331696359 6.94470150246622e-28 5.57891020698119e-26 52.4635349244325
U 3.77298843334184 11.0736715490822 4.65562739557946e-26 2.80501550583662e-24 48.3082740108335
l-glutamine 3.13694403957529 11.0188664345596 7.98762079641145e-26 3.85003322387032e-24 47.7756747741514
U 2.06482005790262 10.064114948792 3.86189656548245e-22 1.55119512046878e-20 39.3960178234482
U 1.92046188863188 10.0015462463594 7.00314471532602e-22 2.41108268056224e-20 38.8103168325071
l-5-oxoproline 1.35681525283051 9.81741929847919 3.23266196772479e-21 9.73839417777093e-20 37.2997505749972
U 3.22188997241823 8.837916159721 1.08348460999742e-17 2.9013310112153e-16 29.3032997911156
l-glutamic acid 1.43330402580376 8.43128753379611 2.48290958297537e-16 5.98381209497063e-15 26.2211357935093
palmitic acid 2.98135052807323 8.40249588094514 3.4674993764814e-16 7.5969759066547e-15 25.8979703442511
U 2.14041993963099 8.29031610120215 7.48663367411286e-16 1.50356559621767e-14 25.1378970508138
U 2.983248671238 8.22105582560065 1.35296326792272e-15 2.50818575053366e-14 24.5596720902779
l-asparagine 2.46368022088336 8.12109792155714 2.591244541089e-15 4.27853856018846e-14 23.9168688466789
nicotianamine 1.60869592603336 8.11706611632211 2.66299080509655e-15 4.27853856018846e-14 23.8899707451638
l-proline 3.46865766185168 7.97011479354636 9.30028146764187e-15 1.40085489606356e-13 22.670756791809
U 1.91121783466809 7.83781241030725 2.09173694025938e-14 2.96534472119124e-13 21.8675227366197
U 1.19012868758624 7.78445018248318 3.02355468249868e-14 4.04820376934546e-13 21.5051252366643
U 1.29412289761285 7.68930561658465 5.98698855441242e-14 7.59402232428102e-13 20.835221244798
U -3.63390222302952 -7.45473364762374 3.47005719430304e-13 3.98313746220263e-12 19.1660955026711
U 1.36778639921932 7.43902835213516 3.47078368075747e-13 3.98313746220263e-12 19.1127581936845
U 1.84008216643538 7.42961678311707 3.71189828390941e-13 4.06621584737349e-12 19.0470666738782
U 1.46742994343625 6.99135349838384 7.19615770343238e-12 7.54032176750958e-11 16.1461137583711
U 2.70911132618812 6.63076824769267 7.91603696009241e-11 7.85677940768638e-10 13.8099315517208
sucrose 1.26931768076286 6.61677490496321 8.15018610755848e-11 7.85677940768638e-10 13.7770040178567
1109:34294-79-6 1.94855317721106 6.50730019078658 1.60178656214751e-10 1.48473292875981e-09 13.1173175820431
U 1.6619828903945 6.44324462632859 2.38736844278496e-10 2.13094738781916e-09 12.7285584560666
1154:arginine, dl-, -nh3 (3tms) 1.59477565321546 6.27285876143378 6.73685065550729e-10 5.79850359991877e-09 11.7182110306083
U 1.65077986945416 6.21869428123427 9.41395699218883e-10 7.82332287971555e-09 11.3935188875344
U 1.36878095001057 6.20273659305778 1.02847975160489e-09 8.26212067122599e-09 11.3068115376903

U: unknown peaks
Limma result myTopTable_ALL_vtc11.tbl.gz